Training materials
Contributors: Anna Syme or Eija Korpelainen or Jan Slifka or Lucille Delisle or Michael Krone or Prof. Tom Freeman or Rafael C Jimenez or Susan Coort or Wendi Bacon
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
video
RDMbites | Decolonising data management in the biosciences
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video
RDMbites | Data management and disabilities
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video
RDMbites | EDIJ and decolonisation in data management
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video
RDMbites | EDIJ and decolonisation in data management: why should I care?
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing