Training materials
Scientific topics: Sequence assembly or Statistics and probability
and Contributors: Anna Syme or CRUK CI Bioinformatics Core or Christophe Klopp or Collins Assisi or Danielle Navarro or Janick Mathys
-
bioinformatics-core-shared-training/experimental-design
-
bioinformatics-core-shared-training/IntroductionToStats
-
bioinformatics-core-shared-training/linear-models-r
-
djnavarro/rbook
-
hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
Bioinformatics Summer School 2019
•• intermediateProteomics RNA-Seq Omics Statistics and probability Data handling