Training materials
Contributors: Anna Syme or Björn Grüning or Dr. Colin Combe or Dr. Nils Gehlenborg or Dr. Steve Jupe or Erwan Corre or Maria Doyle or Mr. William Edward Hill or Pavankumar Videm or Sundeep Agarwal
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
learnbyexample/100_page_python_intro
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learnbyexample/cli_text_processing_coreutils
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learnbyexample/learn_gnused
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learnbyexample/practice_python_projects
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learnbyexample/learn_gnugrep_ripgrep