Training materials
Difficulty level: Beginner
and Contributors: Anna Syme or Bang Wong or Erasmus+ Programme or Espen Åberg or Jyoti Khadake or Tuur Muyldermans
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerSoftware engineering data-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'A short introduction to Galaxy' tutorial
• beginnerintroduction español -
hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming