Training materials
Difficulty level: Beginner
and Contributors: Anil S. Thanki or Anne-Françoise Adam-Blondon or Anton Nekrutenko or Dr. Scooter Morris or Marek Vrbacky or Michael Ball or Nene Barry or Vicky Schneider
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hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics -
hands-on tutorial
Searching Your History
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
NGS data logistics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation