Training materials
Difficulty level: Intermediate
and Contributors: Andrew Mason or Carina Silva or Daniel Faria or Dr. A.J. Pretorius or Linelle Abueg or The Carpentries
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Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediatedata-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediatedata-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediatedata-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediatedata-science jupyter-notebook -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA
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