Training materials
Scientific topics: Software engineering
and Contributors: Andrea Argentini or Dr. Scooter Morris or Fotis E. Psomopoulos or Gildas Le Corguillé or Mateusz Kuzak or Mr. Andy Yates or Ph.D or Prof. Tom Freeman or Rafael C Jimenez
-
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Plotting in Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Advanced R in Galaxy
•• intermediateSoftware engineering Foundations of Data Science R -
hands-on tutorial
R basics in Galaxy
• beginnerSoftware engineering Foundations of Data Science R interactive-tools -
hands-on tutorial
Introduction to Python
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Advanced Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy