Training materials
Contributors: Andrea Argentini or Daniel Blankenberg or Dr. Roland Schwarz or Eija Korpelainen or Emily Angiolini or John "Scooter" Morris or Martin Krzywinski or Mateusz Kuzak or Patricia Palagi or Prof. Tom Freeman or Rafael C Jimenez
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial
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hands-on tutorial
Hands-on for 'PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis' tutorial
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hands-on tutorial
Hands-on for 'Text-mining with the SimText toolset' tutorial
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hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Hands-on for 'Machine Learning Modeling of Anticancer Peptides' tutorial
•• intermediateproteomics ML cancer -
hands-on tutorial
Hands-on for 'NGS data logistics' tutorial
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slides
Slides for 'Reference Data with CVMFS' tutorial
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Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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