Training materials
Contributors: Andrea Argentini or Clair Castle or Donny Vrins or Emily Angiolini or Instituto Gulbenkian de Ciência or Martin Krzywinski or Nils Peder Willassen or Prof. Tom Freeman or Saskia Hiltemann or Stéphanie Robin
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
GTPB/ABSTAT18
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GTPB/IBIP19
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GTPB/PDA19
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GTPB/ELB19F
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GTPB/PSLS20
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GTPB/PSLS22