Training materials
Difficulty level: Beginner
and Contributors: Anatole Chessel or Clair Castle or Daniela Brites or Derek Wright or Erwan Corre or Stian Soiland-Reyes
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Tree thinking for tuberculosis evolution and epidemiology' tutorial
• beginnerevolution prokaryote one-health phylogenetics -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
course materials
Introduction to GitHub for chemists
• beginnerGit GitHub -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner