Training materials
Contributors: Anatole Chessel or Bazante Sanders or Frederick Carver or Jan Slifka or Maria Lehtivaara or Martin Strauch or Martina Kutmon or Munazah Andrabi or Oliver Davis or PhD BSc FSB or Praveen Kumar or The Carpentries Lab
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
carpentries-lab/metagenomics-organization
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carpentries-lab/metagenomics-shell
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carpentries-lab/metagenomics-R
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carpentries-lab/metagenomics-workshop
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carpentries-lab/metagenomics-analysis
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tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
Video
RDMbites | Characters to use and avoid in filenames
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Video
RDMbites | Machine and human readable file naming