Training materials
Contributors: Anatole Chessel or Bazante Sanders or Branka Franicevic or Bérénice Batut or Christopher Barnett or Dan Bolser or Pinar Alper or The Carpentries Lab
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
carpentries-lab/metagenomics-organization
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carpentries-lab/metagenomics-shell
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carpentries-lab/metagenomics-R
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carpentries-lab/metagenomics-workshop
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carpentries-lab/metagenomics-analysis
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format