Training materials
Contributors: Anatole Chessel or Avans Hogeschool or Daniel Faria or Erasmus+ Programme or JuliaAcademy or Matthias Fahrner or The Carpentries Lab
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hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA -
hands-on tutorial
DIA Analysis using OpenSwathWorkflow
•• intermediateProteomics DIA -
hands-on tutorial
Statistical analysis of DIA data
•• intermediateProteomics DIA -
hands-on tutorial
MaxQuant and MSstats for the analysis of label-free data
•• intermediateProteomics label-free -
hands-on tutorial
Label-free data analysis using MaxQuant
• beginnerProteomics DDA label-free -
hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook