Training materials
Resource type: hands-on tutorial
and Contributors: Anatole Chessel or Anup Kumar or Christophe Antoniewski or Delphine Lariviere or Ray Sajulga or Yvan Le Bras
33 materials found
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hands-on tutorial
Ecoregionalization workflow tutorial
• beginnerEcology EBV workflow earth-system ecology gbif interactive-tools modeling ocean taxonomic data -
hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Champs blocs indicators
• beginnerEcology EBV dataset EBV workflow Ecosystem EBV class Marine ecosystems -
hands-on tutorial
Visualize EBV cube data with Panoply netCDF viewer
• beginnerEcology Data visualization EBV cube interactive-tools -
hands-on tutorial
Cleaning GBIF data for the use in Ecology
• beginnerEcology data cleaning data management gbif -
hands-on tutorial
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
hands-on tutorial
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote