Training materials
Difficulty level: Beginner
and Contributors: Anatole Chessel or Anne-Françoise Adam-Blondon or Enis Afgan or Erwan Corre or Nicola Soranzo or The Gulbenkian Training Programme in Bioinforma... or carpentries-incubator
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Mapping Jobs to Destinations using TPV
• beginnerGalaxy Server administration git-gat jobs -
hands-on tutorial
External Authentication
• beginnerGalaxy Server administration authentication -
hands-on tutorial
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration git-gat tools -
hands-on tutorial
Hands-on for 'A short introduction to Galaxy' tutorial
• beginnerintroduction español -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses