Training materials
Difficulty level: Beginner
and Contributors: Anatole Chessel or Anne-Françoise Adam-Blondon or Biocore@CRG or Eija Korpelainen or Stéphanie Robin
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq