Training materials
and Contributors: Anatole Chessel or Anna Syme or Avans Hogeschool or Christine Balmer, UKCEH or Helena Rasche or Wendi Bacon
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
Jaqpot Hackathon - Training materials
••• advancednanoinformatics toxicity prediction e-tools Modeling data FAIRness