Training materials
Target audience: Students or computational scientists
and Contributors: Anatole Chessel or Andrea Bagnacani or Computational Biology and Bioinformatics at UCL... or Mallory Freeberg or Matthias Bernt or Ph.D.
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hands-on tutorial
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy -
hands-on tutorial
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Differential abundance testing of small RNAs
• beginnerTranscriptomics -
hands-on tutorial
Visualization of RNA-Seq results with CummeRbund
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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slides
Visualization of RNA-Seq results with CummeRbund
• beginnerTranscriptomics -
slides
Introduction to 'Introduction to Galaxy Analyses'
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Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner