Training materials
Scientific topics: Sequence databases
and Contributors: Alvaro Gonzalez or Dr. Sean I O’Donoghue or Erwan Corre or Joachim Wolff or Michael Parkin or Pratik Jagtap or Saskia Hiltemann or Wolfgang Maier
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Removal of human reads from SARS-CoV-2 sequencing data
•• intermediateSequence analysis covid19 -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Mapping
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis