Training materials
Contributors: Alvaro Gonzalez or Branka Franicevic or Clair Castle or Cristóbal Gallardo or UC Davis Bioinformatics Core Training Page or Wolfgang Maier or Wolmar Nyberg Åkerström
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hands-on tutorial
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
ucdavis-bioinformatics-training/2021-August-Iso-Seq
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ucdavis-bioinformatics-training/2021-May-Microbial-Community-Analysis
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ucdavis-bioinformatics-training/2023-June-Advanced-Topics-in-Single-Cell-RNA-Seq-VDJ
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ucdavis-bioinformatics-training/2023-September-Introduction-to-the-Command-Line-for-Bioinformatics
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ucdavis-bioinformatics-training/2023-July-Introduction-To-Python-For-Bioinformatics
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ucdavis-bioinformatics-training/2023-June-Introduction-to-R-for-Bioinformatics
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ucdavis-bioinformatics-training/2022-December-Spatial-Transcriptomics
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ucdavis-bioinformatics-training/2022-July-Advanced-Topics-in-Single-Cell-RNA-Seq-ATAC
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ucdavis-bioinformatics-training/2021-August-Advanced-Topics-in-Single-Cell-RNA-Seq-Trajectory-and-Velocity