Training materials
Contributors: Alvaro Gonzalez or Anton Nekrutenko or Daniel Blankenberg or Eija Korpelainen or Hadley Wickham or John Chilton or Ray Sajulga or Simon Gladman
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ekorpela/cloud-vm-workshop
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hadley/r-pkgs
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hadley/ggplot2-book
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hadley/mastering-shiny
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hadley/adv-r
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hadley/r4ds
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote