Training materials
Contributors: Allyson Lister or Anatole Chessel or Branka Franicevic or Collins Assisi or Gianmauro Cuccuru or NBIS - National Bioinformatics Infrastructure S... or Saskia Hiltemann or Software Carpentry
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
video
RDMbites | Decolonising data management in the biosciences
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video
RDMbites | Data management and disabilities
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video
RDMbites | EDIJ and decolonisation in data management
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video
RDMbites | Why share your data?
• beginnerdata management RDM -
video
RDMbites | EDIJ and decolonisation in data management: why should I care?
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Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training