Training materials
Scientific topics: Multidrug resistance or Theoretical biology
and Contributors: Allegra Via or Bazante Sanders or Branka Franicevic or Collins Assisi or Mark Beaumont or Sundeep Agarwal or Yvan Le Bras
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools