Training materials
Resource type: hands-on tutorial
and Contributors: Allegra Via or Avans Hogeschool or Clemens Blank or Delphine Lariviere or Dr. Steve Jupe or Gildas Le Corguillé or Maria Lehtivaara
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hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Metaproteomics tutorial
• beginnerProteomics Proteogenomics Biodiversity Taxonomy microgalaxy -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook