Training materials
Contributors: Allegra Via or AstraZeneca or CRUK CI Bioinformatics Core or Florian Heyl or Marius van den Beek or Mehmet Tekman or Prof. Richard Baldock or The Carpentries
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
bioinformatics-core-shared-training/nextflow_september_2021
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21
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semacu/20180223_ORCID_Chemistry_Cambridge
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bioinformatics-core-shared-training/r-basics
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semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge
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semacu/20180726_TrainMalta_Unix_R
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semacu/20190927_IntroductionGithub_HDRUK