Training materials
Target audience: Students
and Contributors: Alireza Khanteymoori or Michael Parkin or Mo Heydarian or Ph.D. or Ross Lazarus or Saskia Hiltemann
-
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Hands-on for 'ToolFactory: Generating Tools From More Complex Scripts' tutorial
-
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Hands-on for 'Antibiotic resistance detection' tutorial