Training materials
Contributors: Alireza Khanteymoori or David Philip Judge or Derek Wright or Emma Leith or Erik Garrison or Gildas Le Corguillé or Wendi Bacon
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hands-on tutorial
Hands-on for 'EncyclopeDIA' tutorial
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hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry: LC-MS analysis
• beginnerMetabolomics -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Introduction to deep learning
• beginnerStatistics and probability Statistics and machine learning -
slides
Introduction to 'Metabolomics'
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Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics