Training materials
Contributors: Alireza Khanteymoori or David Bouyssié or Gildas Le Corguillé or Ion Moraru or Saskia Hiltemann or Teaching materials at the Harvard Chan Bioinfor... or The Carpentries Lab or cambiotraining
-
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
cambiotraining/corestats
-
cambiotraining/python-data-science
-
carpentries-lab/metagenomics-organization
-
hbctraining/BBS230B_2023
-
hbctraining/RNA-seq-CB321qc_2022
-
carpentries-lab/metagenomics-shell