Training materials
Contributors: Alireza Khanteymoori or Bazante Sanders or Dr. Konstantinos Sidiropoulos or Dr. Martin Graham or Fotis E. Psomopoulos or Jure Dimec or Michael Krone or Prof. Tom Freeman or Wolmar Nyberg Åkerström or cambiotraining
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
cambiotraining/corestats
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cambiotraining/python-data-science
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cambiotraining/hpc-intro
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cambiotraining/sars-cov-2-genomics
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cambiotraining/intro-machine-learning
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lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot