Training materials
Contributors: Alireza Khanteymoori or Anika Erxleben or Avans Hogeschool or Bazante Sanders or Célia Michotey or Lounès Chikhi or Munazah Andrabi or Robert Andrews
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
video
RDMbites | Analysis Organisation
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video
RDMbites | RNAseq data submission: ArrayExpress
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video
RDMbites | Metadata: where to find published ontologies
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video
RDMbites | High-throughput sequencing data repositories
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video
RDMbites | Making code available in a repository
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video
RDMbites | Package and environment management systems
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video
RDMbites | Improve your analysis reproducibility and data provenance with computational notebooks
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video
RDMbites | RNAseq data submission: metadata