Training materials
Difficulty level: Beginner
and Contributors: Alireza Khanteymoori or Alvaro Gonzalez or Stian Soiland-Reyes or Tuur Muyldermans or Vilem Ded or Wolfgang Maier
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming