Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Emily Angiolini or Jamie Edwards or Luigi Grassi or Prof. Tom Freeman or Thomas Denecker or Tuur Muyldermans
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse -
Slides
FAIR data - Module 1 (research data)
• beginnermetadata Data Life Cycle Reproducibility Data management plan -
Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
• beginnerUnix R-programming -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming