Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Emily Angiolini or Espen Åberg or Jamie Edwards or Luigi Grassi or Prof. Tom Freeman or Tuur Muyldermans
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
• beginnerUnix R-programming -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming