Training materials
Contributors: Alexandre Cormier or Dr. Stephen David Laycock or Felix Almonte or Michael Ball or Michael Krone or Pavel Dvorak or Pip Griffin or Saskia Hiltemann or Vicky Schneider or Wolmar Nyberg Åkerström or rstudio::conf(2022)
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
rstudio-conf-2022/intro-to-tidyverse
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rstudio-conf-2022/teach-ds
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rstudio-conf-2022/build-tidy-tools
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rstudio-conf-2022/wtf-rstats
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rstudio-conf-2022/get-started-shiny
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rstudio-conf-2022/shiny-prod-apps