Training materials
Contributors: Alexandre Cormier or Dr. Simon Tomlinson or Marek Suchanek or Martin Čech or Michael Ball or Saskia Hiltemann or Vicky Schneider
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Genomic Data Visualisation with JBrowse' tutorial
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hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Set up a Galaxy for Training
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy