Training materials
Contributors: Alexandre Cormier or Andrea Argentini or Anton Nekrutenko or Cristóbal Gallardo or Dr. Iain Milne or Dr. Stephen David Laycock or Gildas Le Corguillé or Jure Dimec or Mateusz Kuzak or Matthias Fahrner or Patricia Palagi or Prof. Tom Freeman
-
hands-on tutorial
Hands-on for 'Comparative gene analysis in unannotated genomes' tutorial
-
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
-
hands-on tutorial
Hands-on for 'Calling variants in non-diploid systems' tutorial
-
hands-on tutorial
Hands-on for 'Calling very rare variants' tutorial
-
hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
-
hands-on tutorial
Hands-on for 'Visualisation with Circos' tutorial
-
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP