Training materials
Difficulty level: Beginner
and Contributors: Alexander Botzki or Anthony Bretaudeau or Celia van Gelder or Eija Korpelainen or Fotis E. Psomopoulos or Manimozhiyan Arumugam or Paul Yorke
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerdata-science jupyter-notebook -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy -
Jupyter notebooks
Gentle hands-on introduction to Python programming
• beginnerSoftware engineering Python programming