Training materials
Contributors: Alex Ostrovsky or CRUK CI Bioinformatics Core or Dr. Colin Combe or Dr. Simon Andrews or Elin Kronander or Mehmet Tekman or Michael Krone or Oliver Davis or Prof. Tom Freeman or Sabine Österle
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
bioinformatics-core-shared-training/nextflow_september_2021
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21
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bioinformatics-core-shared-training/r-basics
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bioinformatics-core-shared-training/SingleCell_RNASeq_Jan23
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bioinformatics-core-shared-training/UnivCambridge_ScRnaSeq_Nov2021
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_March23
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bioinformatics-core-shared-training/Quantitative-ChIPseq-Workshop
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bioinformatics-core-shared-training/experimental-design