Training materials
Contributors: Alex Ostrovsky or Björn Grüning or Brane Leskosek or Celia van Gelder or Dr. Sean I O’Donoghue or Manimozhiyan Arumugam or Marek Vrbacky or Ms. Yo Yehudi or Shyam Gopalakrishnan
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Calling variants in non-diploid systems' tutorial
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hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Creating Galaxy tools from Conda Through Deployment
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP