Training materials
Contributors: Alex Ostrovsky or Alexandre Cormier or AstraZeneca or David Bouyssié or Dr. Konstantinos Sidiropoulos or Mattias Strömberg or Munazah Andrabi or Pavankumar Videm or Sundeep Agarwal
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
semacu/20180223_ORCID_Chemistry_Cambridge
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semacu/20180726_TrainMalta_Unix_R
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semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge
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semacu/20190927_IntroductionGithub_HDRUK
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semacu/20171024_GitHub_Chemistry_Cambridge