Training materials
Contributors: Alex Mitchell or Bazante Sanders or Biocore@CRG or Daniel Sobral or Emily Angiolini or Mark Beaumont or The Carpentries or Wolfgang Maier
-
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
biocorecrg/CRG_RIntroduction_2021
-
biocorecrg/CRG_R_tidyverse_2021
-
biocorecrg/SIB_course_nextflow_Nov_2021
-
biocorecrg/ELIXIR_containers_nextflow
-
biocorecrg/RNAseq_course_2019
-
biocorecrg/CoursesCRG_Containers_Nextflow_May_2022
-
hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Teaching Python
• beginnerContributing to the Galaxy Training Material