Training materials
Contributors: Ajay Pillai or CRUK CI Bioinformatics Core or Collins Assisi or Dr. Iain Milne or Erik Hedman or Instituto Gulbenkian de Ciência or Mehmet Tekman or Munazah Andrabi
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
bioinformatics-core-shared-training/nextflow_september_2021
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21
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bioinformatics-core-shared-training/r-basics
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GTPB/ABSTAT18
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GTPB/IBIP19
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GTPB/PDA19
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bioinformatics-core-shared-training/SingleCell_RNASeq_Jan23