Training materials
Include archived: true
and Contributors: Ajay Pillai or Björn Grüning or Donny Vrins or Eva Freyhult or James Johnson or Jan Slifka or John Davis or Matthias Fahrner or Mehmet Tekman or Michael Krone or Nicola Mulder or Oliver Davis or PhD BSc FSB
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
hands-on tutorial
Teaching Python
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Multiprocessing
••• advancedSoftware engineering Foundations of Data Science jupyter-notebook