Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: John Sundh or Erasmus+ Programme or Fotis E. Psomopoulos or Gianmauro Cuccuru or Lieven Clement or The Carpentries Lab or Youri Hoogstrate
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Teaching experiences
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Live Coding is a Skill
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generic plugins
• beginnerSoftware engineering Development in Galaxy