Training materials
Include archived: true
and Contributors: John Sundh or Christopher Barnett or David Bouyssié or Eija Korpelainen or Rob Finn or Saskia Hiltemann or Simon Gladman or The Carpentries Lab
-
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
carpentries-lab/metagenomics-organization
-
carpentries-lab/metagenomics-shell
-
carpentries-lab/metagenomics-R
-
carpentries-lab/metagenomics-workshop
-
carpentries-lab/metagenomics-analysis
-
ekorpela/cloud-vm-workshop