Training materials
Contributors: John Sundh or Anne Pajon or Anne-Françoise Adam-Blondon or Branka Franicevic or Canadian Bioinformatics Workshops or Dr. Iain Milne or Saskia Hiltemann
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
bioinformatics-ca/AUR_2021
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bioinformatics-ca/INR_2021
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bioinformatics-ca/PNA_2021
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bioinformatics-ca/RNA_2021
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bioinformatics-ca/MIC_2021
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bioinformatics-ca/EPI_2021