Training materials
Keywords: bash or prokaryote
and Contributors: John Sundh or Anne Fouilloux or Bilal Shaikh or Carina Silva or Helena Rasche or Thoba Lose
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hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote