Training materials
Contributors: John Sundh or Anna Syme or Dave Clements or Roland Krause or UC Davis Bioinformatics Core Training Page or carpentries-incubator
-
carpentries-incubator/docker-introduction
-
carpentries-incubator/introduction-to-conda-for-data-scientists
-
carpentries-incubator/python-testing
-
carpentries-incubator/hpc-intro
-
hands-on tutorial
Hands-on for 'Large genome assembly and polishing' tutorial
-
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
-
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
-
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Chloroplast genome assembly' tutorial
-
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP