Training materials
Difficulty level: Beginner
and Contributors: Federico Bianchini or Alex Ostrovsky or Dr. Nils Gehlenborg or Emma Leith or NBIS - National Bioinformatics Infrastructure S... or Praveen Kumar or Vicky Schneider
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hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Creating Galaxy tools from Conda Through Deployment
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
EncyclopeDIA
• beginnerProteomics DIA -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
slides
Dealing with Cross-Contamination in Fixed Barcode Protocols
• beginnerTranscriptomics Single Cell