Training materials
Contributors: @posit-pbc or Blaise Li or Dr. Nils Gehlenborg or Dr. Roland Schwarz or Instituto Gulbenkian de Ciência or Niclas Jareborg or Pavankumar Videm or Sundeep Agarwal
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
wesm/pydata-book
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Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
wch/rgcookbook
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GTPB/ABSTAT18
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GTPB/PDA19
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GTPB/IBIP19